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JG24_28120 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_28120" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_28120Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)    
Predicted Functional Partners:
JG24_28125
Derived by automated computational analysis using gene prediction method- Protein Homology (669 aa)
 
          0.789
JG24_28130
Derived by automated computational analysis using gene prediction method- Protein Homology (410 aa)
 
          0.745
JG24_13135
L-rhamnose operon regulatory protein RhaS; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
   
          0.672
JG24_27250
Transcriptional regulator, AraC family; Derived by automated computational analysis using gene prediction method- Protein Homology (122 aa)
   
 
      0.646
JG24_22430
Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
 
      0.569
JG24_13700
Derived by automated computational analysis using gene prediction method- Protein Homology (161 aa)
   
 
      0.541
JG24_29380
Right origin-binding protein; AraC family; binds to the right arm of the replication origin oriC; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
 
 
 
  0.536
JG24_27335
Regulatory protein SoxS; Regulates genes involved in response to oxidative stress; Derived by automated computational analysis using gene prediction method- Protein Homology (109 aa)
   
          0.533
JG24_19255
Right origin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (118 aa)
   
          0.526
JG24_29720
Ribulokinase; Catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (569 aa)
 
     
  0.501
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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