STRINGSTRING
JG24_28150 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_28150" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_28150Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)    
Predicted Functional Partners:
JG24_28145
Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
 
          0.544
JG24_28155
Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
              0.542
JG24_09490
Tartrate dehydrogenase / Tartrate decarboxylase / D-malic enzyme; Derived by automated computational analysis using gene prediction method- Protein Homology (362 aa)
   
   
  0.503
JG24_11690
Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DapA family (294 aa)
   
          0.498
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (273 aa)
 
   
  0.449
JG24_18670
Derived by automated computational analysis using gene prediction method- Protein Homology (365 aa)
 
        0.438
JG24_16050
Rhamnogalacturonides degradation protein RhiN; Derived by automated computational analysis using gene prediction method- Protein Homology (379 aa)
 
        0.435
JG24_14405
Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
   
        0.432
JG24_07590
Tartrate dehydrogenase / Tartrate decarboxylase / D-malic enzyme; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
   
   
  0.422
JG24_13170
Derived by automated computational analysis using gene prediction method- Protein Homology (398 aa)
 
   
  0.416
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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