STRINGSTRING
JG24_28960 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_28960" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_28960Derived by automated computational analysis using gene prediction method- Protein Homology (2620 aa)    
Predicted Functional Partners:
JG24_28955
Derived by automated computational analysis using gene prediction method- Protein Homology (560 aa)
   
  0.928
JG24_28965
Derived by automated computational analysis using gene prediction method- Protein Homology (72 aa)
              0.845
JG24_05805
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (556 aa)
   
  0.794
JG24_04720
Derived by automated computational analysis using gene prediction method- Protein Homology (553 aa)
 
   
  0.777
JG24_01100
Derived by automated computational analysis using gene prediction method- Protein Homology (558 aa)
 
   
  0.771
JG24_11910
Fimbrial adhesin; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
           
  0.652
JG24_00860
Virulence-associated protein vagC; Derived by automated computational analysis using gene prediction method- Protein Homology (76 aa)
           
  0.650
lapA
Lipopolysaccharide assembly protein A; Involved in the assembly of lipopolysaccharide (LPS) (102 aa)
           
  0.646
JG24_28970
Derived by automated computational analysis using gene prediction method- GeneMarkS+ (81 aa)
              0.604
fimA
Type 1 fimbriae major subunit FimA; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
           
  0.601
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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