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JG24_29780 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_29780" - Transcriptional regulator, LysR family in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
JG24_29780Transcriptional regulator, LysR family; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)    
Predicted Functional Partners:
JG24_29790
Putative transport system permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (404 aa)
   
 
      0.695
JG24_09840
Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
   
          0.654
JG24_14495
Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.628
JG24_11805
Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
   
          0.621
JG24_29800
2,4-dienoyl-CoA reductase [NADPH]; Derived by automated computational analysis using gene prediction method- Protein Homology (677 aa)
 
          0.598
JG24_29795
Shikimate/quinate 5-dehydrogenase I beta; YdiB; quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
   
          0.594
JG24_09475
Transcriptional regulator, MarR family; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
   
     
  0.560
JG24_12565
Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
   
          0.520
JG24_29775
Probable glucarate transporter; Involved in the transport of galactonate; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
     
      0.519
JG24_05350
Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.502
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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