STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG13574.1Alpha-amylase; KEGG: mja:MJ1611 alpha-amylase (AmyA); PFAM: glycoside hydrolase family 57. (430 aa)    
Predicted Functional Partners:
ADG13199.1
KEGG: mfe:Mefer_1323 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase.
 
 
 0.951
ADG13575.1
PFAM: glycoside hydrolase 15-related; KEGG: mvu:Metvu_0781 oligosaccharide amylase.
 
  
 0.912
ADG13573.1
Adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily.
       0.773
ADG12922.1
PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mfe:Mefer_1514 glycosyl transferase group 1.
 
  
 0.728
dcd
Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.529
ADG13577.1
TIGRFAM: porphobilinogen deaminase; KEGG: mja:MJ0569 porphobilinogen deaminase (HemC); PFAM: Porphobilinogen deaminase.
       0.529
ADG13578.1
KEGG: mja:MJ0921 hypothetical protein; TIGRFAM: methanogenesis marker protein 11; PFAM: domain of unknown function DUF1743.
       0.529
apgM
Phosphonopyruvate decarboxylase-related protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.525
ADG12921.1
PFAM: Protein of unknown function DUF2582; KEGG: mvu:Metvu_0782 protein of unknown function DUF2582.
       0.474
ADG13343.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: mfe:Mefer_1042 putative cytoplasmic protein.
  
    0.449
Your Current Organism:
Methanocaldococcus infernus
NCBI taxonomy Id: 573063
Other names: M. infernus ME, Methanocaldococcus infernus DSM 11812, Methanocaldococcus infernus ME, Methanocaldococcus infernus str. ME, Methanocaldococcus infernus strain ME
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.