STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU15116.1KEGG: psl:Psta_3726 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase. (206 aa)    
Predicted Functional Partners:
ADU15117.1
PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase.
  
    0.863
ADU13487.1
PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01548 transporter.
  
  
 0.659
ADU14176.1
PFAM: aminotransferase class V; KEGG: xac:XAC0300 serine-pyruvate aminotransferase.
     
 0.465
hisB
PFAM: imidazoleglycerol-phosphate dehydratase; aminotransferase class I and II; KEGG: apb:SAR116_0442 histidinol-phosphate aminotransferase.
 
  
 0.459
ADU13782.1
KEGG: csa:Csal_0636 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
   
 0.441
ADU13963.1
KEGG: alv:Alvin_1965 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.438
ADU12617.1
KEGG: cja:CJA_0398 alpha amylase, putative, amy13F; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
  
 0.422
ADU14557.1
Transketolase central region protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
  
 0.419
ADU13039.1
PFAM: alpha amylase catalytic region; KEGG: ccs:CCNA_01193 amylosucrase.
 
  
 0.413
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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