STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
nifHNitrogenase iron protein nitrogenase component II; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (274 aa)    
Predicted Functional Partners:
nifK
Nitrogenase molybdenum-iron protein beta chain nitrogenase component I; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
 0.999
nifD
Nitrogenase molybdenum-iron protein alpha chain nitrogenase component I.
 0.999
nifE
Nitrogenase MoFe cofactor biosynthesis protein; Belongs to the NifD/NifK/NifE/NifN family.
 
 0.984
nifN
Nitrogenase molybdenum-iron cofactor biosynthesis protein; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.980
nifB
Nitrogenase cofactor biosynthesis protein.
 
  
 0.967
glnA
Glutamine synthetase type I.
   
 
 0.933
nrfH
Cytochrome c nitrite reductase small subunit.
     
 0.915
nrfA
Cytochrome c nitrite reductase catalytic subunit; Belongs to the cytochrome c-552 family.
     
 0.915
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.915
glnN
Glutamine synthetase type III.
     
 0.907
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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