Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DMR_06140 | DMR_35530 | DMR_06140 | DMR_35530 | Putative aldolase. | 6-phosphofructokinase. | 0.914 |
DMR_06140 | DMR_38050 | DMR_06140 | DMR_38050 | Putative aldolase. | 6-phosphofructokinase. | 0.914 |
DMR_06140 | DMR_44980 | DMR_06140 | DMR_44980 | Putative aldolase. | Transaldolase family protein. | 0.954 |
DMR_06140 | DMR_45520 | DMR_06140 | DMR_45520 | Putative aldolase. | Ketose-bisphosphate aldolase class-II family protein. | 0.920 |
DMR_06140 | aroA-2 | DMR_06140 | DMR_05370 | Putative aldolase. | Putative aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids. | 0.913 |
DMR_06140 | fbp | DMR_06140 | DMR_21630 | Putative aldolase. | Fructose-1,6-bisphosphatase. | 0.918 |
DMR_06140 | glpX | DMR_06140 | DMR_21070 | Putative aldolase. | Fructose-1,6-bisphosphatase class II. | 0.911 |
DMR_06140 | pgi | DMR_06140 | DMR_22840 | Putative aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.832 |
DMR_06140 | tkt | DMR_06140 | DMR_21080 | Putative aldolase. | Transketolase; Belongs to the transketolase family. | 0.952 |
DMR_35530 | DMR_06140 | DMR_35530 | DMR_06140 | 6-phosphofructokinase. | Putative aldolase. | 0.914 |
DMR_35530 | DMR_38050 | DMR_35530 | DMR_38050 | 6-phosphofructokinase. | 6-phosphofructokinase. | 0.903 |
DMR_35530 | DMR_44980 | DMR_35530 | DMR_44980 | 6-phosphofructokinase. | Transaldolase family protein. | 0.920 |
DMR_35530 | DMR_45520 | DMR_35530 | DMR_45520 | 6-phosphofructokinase. | Ketose-bisphosphate aldolase class-II family protein. | 0.952 |
DMR_35530 | aroA-2 | DMR_35530 | DMR_05370 | 6-phosphofructokinase. | Putative aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids. | 0.914 |
DMR_35530 | fbp | DMR_35530 | DMR_21630 | 6-phosphofructokinase. | Fructose-1,6-bisphosphatase. | 0.922 |
DMR_35530 | glpX | DMR_35530 | DMR_21070 | 6-phosphofructokinase. | Fructose-1,6-bisphosphatase class II. | 0.918 |
DMR_35530 | pgi | DMR_35530 | DMR_22840 | 6-phosphofructokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.983 |
DMR_35530 | tkt | DMR_35530 | DMR_21080 | 6-phosphofructokinase. | Transketolase; Belongs to the transketolase family. | 0.925 |
DMR_35530 | xanB | DMR_35530 | DMR_18000 | 6-phosphofructokinase. | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.931 |
DMR_38050 | DMR_06140 | DMR_38050 | DMR_06140 | 6-phosphofructokinase. | Putative aldolase. | 0.914 |
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