STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79213.1Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: eok:G2583_4914 putative periplasmic ribose-binding protein of ABC transport system; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative carbohydrate binding protein; PFAM: family. (317 aa)    
Predicted Functional Partners:
ADK79215.1
Inner-membrane translocator; COGs: COG4158 ABC-type sugar transport system permease component; InterPro IPR001851; KEGG: npu:Npun_R5324 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
  
 0.918
ADK80165.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: sme:SM_b20352 sugar ABC transporter permease protein; PFAM: inner-membrane translocator; SPTR: ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.804
ADK79389.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: sme:SM_b20352 sugar ABC transporter permease protein; PFAM: inner-membrane translocator; SPTR: ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.794
ADK81814.1
Inner-membrane translocator; COGs: COG4158 ABC-type sugar transport system permease component; InterPro IPR001851; KEGG: tte:TTE0205 ribose/xylose/arabinose/galactoside ABC-type transporter permease; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.783
ADK80792.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: gtn:GTNG_1814 ribose ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Ribose ABC transporter (Permease); PFAM: Branched-chain amino acid transport system / permease component.
 
 0.748
ADK82704.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: lhk:LHK_01713 RbsC; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.745
ADK79956.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: bha:BH2321 sugar ABC transporter (permease); PFAM: inner-membrane translocator; SPTR: Sugar ABC transporter (Permease); PFAM: Branched-chain amino acid transport system / permease component.
 
 0.740
ADK82546.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: gka:GK1893 sugar ABC transporter (permease); PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.735
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.716
ADK81952.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR013656:IPR013767:IPR003661:IPR 003594:IPR001789:IPR004358:IPR005467:IPR000700:IPR001610; KEGG: glo:Glov_3522 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator rec [...]
  
 
 0.716
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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