STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79259.1NUDIX hydrolase; InterPro IPR000086:IPR020084; KEGG: dat:HRM2_01950 MutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase); PFAM: NUDIX hydrolase; SPTR: MutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase); PFAM: NUDIX domain. (320 aa)    
Predicted Functional Partners:
ADK79258.1
Protein of unknown function DUF6 transmembrane; InterPro IPR000620; KEGG: gau:GAU_0613 hypothetical membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Hypothetical membrane protein; PFAM: EamA-like transporter family.
  
    0.760
ADK79260.1
COGs: COG1435 Thymidine kinase; KEGG: bdu:BDU_798 thymidine kinase; SPTR: Thymidine kinase; PFAM: Thymidine kinase.
 
   
 0.699
ADK82885.1
Uracil-DNA glycosylase superfamily; InterPro IPR002198:IPR005122; KEGG: dat:HRM2_39870 SmuG; PFAM: Uracil-DNA glycosylase superfamily; SPTR: SmuG; PFAM: Uracil DNA glycosylase superfamily.
 
     0.520
ADK82865.1
Dual specificity protein phosphatase; InterPro IPR016130:IPR003595:IPR000242:IPR000387; KEGG: tsi:TSIB_1060 protein tyrosine/serine/threonine phosphatase; PFAM: tyrosine specific protein phosphatase; SMART: Protein-tyrosine phosphatase, catalytic; SPTR: Protein tyrosine/serine/threonine phosphatase; PFAM: Dual specificity phosphatase, catalytic domain.
 
   
 0.504
ADK81405.1
HhH-GPD family protein; COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265; KEGG: gsu:GSU1613 A/G-specific adenine glycosylase, putative; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: A/G-specific adenine glycosylase, putative; PFAM: HhH-GPD superfamily base excision DNA repair protein.
  
 0.497
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
   
 0.472
ADK83305.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: cth:Cthe_1349 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
    0.402
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.