STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80382.1Type III effector Hrp-dependent outer protein; COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: bmr:BMI_II146 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF1537. (415 aa)    
Predicted Functional Partners:
ADK80381.1
Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: mmw:Mmwyl1_2551 putative aldolase; PFAM: class II aldolase/adducin family protein; SPTR: Putative uncharacterized protein; PFAM: Class II Aldolase and Adducin N-terminal domain.
  
 0.974
ADK82375.1
Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: vha:VIBHAR_04752 putative aldolase; PFAM: class II aldolase/adducin family protein; SPTR: Class II aldolase/adducin N-terminal domain-containing protein; PFAM: Class II Aldolase and Adducin N-terminal domain.
  
 0.900
ADK80383.1
Protein of unknown function DUF112 transmembrane; COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: dhd:Dhaf_2075 protein of unknown function DUF112 transmembrane; PFAM: protein of unknown function DUF112 transmembrane; SPTR: Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family.
       0.781
ADK81505.1
Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: rba:RB681 L-fuculose-phosphate aldolase; PFAM: class II aldolase/adducin family protein; SPTR: Putative uncharacterized protein; PFAM: Class II Aldolase and Adducin N-terminal domain.
 
  
 0.771
ADK82377.1
Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: rde:RD1_3790 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase.
 
     0.763
ADK80384.1
KEGG: xau:Xaut_0483 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctB family.
       0.762
ADK80386.1
SAF domain-containing protein; COGs: COG4091 homoserine dehydrogenase; KEGG: pde:Pden_3388 SAF domain-containing protein; SPTR: SAF domain protein.
 
     0.752
ADK80380.1
Protein of unknown function DUF1456; COGs: COG4807 conserved hypothetical protein; InterPro IPR009921; KEGG: yen:YE2874 hypothetical protein; PFAM: protein of unknown function DUF1456; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1456).
       0.590
ADK80379.1
Methyltransferase type 11; InterPro IPR013216; KEGG: cai:Caci_2025 methyltransferase type 12; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Tellurite resistance protein TehB.
       0.582
ADK79381.1
Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: hor:Hore_18470 L-fuculose phosphate aldolase; PFAM: class II aldolase/adducin family protein; SPTR: L-fuculose phosphate aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
 
  
 0.551
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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