STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL12912.1Sporulation integral membrane protein YlbJ; COGs: COG3314 conserved hypothetical protein; InterPro IPR014226:IPR011642; KEGG: hor:Hore_10150 sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; SPTR: B8CWV2 Sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ. (416 aa)    
Predicted Functional Partners:
ADL12158.1
Sporulation protein YqfD; InterPro IPR010690; KEGG: dae:Dtox_3071 sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; SPTR: C1THU0 Sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.
 
   
 0.845
ADL12157.1
Sporulation protein YqfC; InterPro IPR009877; KEGG: drm:Dred_2486 hypothetical protein; PFAM: protein of unknown function DUF1429; SPTR: A4J7E3 Putative uncharacterized protein; TIGRFAM: sporulation protein YqfC; PFAM: YabP family; TIGRFAM: sporulation protein YqfC.
 
   
 0.834
ADL13217.1
Stage II sporulation protein M; COGs: COG1300 membrane protein; InterPro IPR014196:IPR002798; KEGG: hor:Hore_06860 sporulation stage II protein M; PFAM: protein of unknown function DUF95 transmembrane; SPTR: B8CVX4 Sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
   
 0.785
ADL12294.1
Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.779
ADL13253.1
InterPro IPR014194; KEGG: hor:Hore_06210 sporulation stage III protein AE; PFAM: Sporulation stage III protein AE; SPTR: B8D2F1 Sporulation stage III protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
    0.777
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.769
ADL13254.1
InterPro IPR014211; KEGG: cth:Cthe_0842 stage III sporulation protein AD; PFAM: Sporulation stage III protein AD; SPTR: A3DDP8 Stage III sporulation protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.
  
     0.764
ADL12385.1
InterPro IPR014202; KEGG: cce:Ccel_0292 stage II sporulation protein R; PFAM: Sporulation stage II protein R; SPTR: C7ID14 Stage II sporulation protein R; TIGRFAM: stage II sporulation protein R; PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R.
  
   
 0.762
ADL13233.1
Stage IV sporulation protein B; InterPro IPR014219:IPR008763:IPR001478; KEGG: hor:Hore_06580 peptidase S55 sporulation stage IV protein B; PFAM: peptidase S55 SpoIVB; PRIAM: SpoIVB peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: B8D2I8 Peptidase S55 sporulation stage IV protein B; TIGRFAM: stage IV sporulation protein B; PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B.
  
     0.760
ADL13251.1
KEGG: hor:Hore_06230 sporulation stage III protein AG; SPTR: B8D2F3 Sporulation stage III protein AG; TIGRFAM: stage III sporulation protein AG.
  
   
 0.759
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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