STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_16655DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 0.991
BAMA_06390
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.971
BAMA_15560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.970
BAMA_16660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.965
BAMA_14355
5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.857
BAMA_13900
ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.846
BAMA_21290
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.846
dinG
ATP-dependent DNA helicase; 3'-5' exonuclease.
  
 0.750
BAMA_15110
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.744
BAMA_24420
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.744
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.