STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB8Type IV secretion system protein VirB8. (229 aa)    
Predicted Functional Partners:
virB4
Type IV secretion system protein VirB4.
 
 
 0.997
virB10
Type IV secretion system protein VirB10.
 
  
 0.996
virB9
Type IV secretion system protein VirB9.
 
  
 0.995
virB3
Type IV secretion system protein VirB3.
 
 
 0.993
virD4
Type IV secretion system protein VirD4.
 
   
 0.971
ACIS_00304
Type IV secretion system protein VirB4.
 
 
 0.970
ACIS_00530
Putative conjugal transfer protein.
 
  
 0.968
virB11
Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
 
  
 0.961
trbG
Putative conjugal transfer protein TrbG.
 
  
 0.959
ACIS_00571
Putative type IV secretion system protein VirB8; Contains conserved domain COG3736: type IV secretory pathway, component VirB8.
     
 0.943
Your Current Organism:
Anaplasma centrale
NCBI taxonomy Id: 574556
Other names: A. centrale str. Israel, Anaplasma centrale str. Israel, Anaplasma centrale strain Israel, Anaplasma marginale subsp. centrale str. Israel
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.