STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YJ70_COCSCUncharacterized protein. (516 aa)    
Predicted Functional Partners:
I0Z0D2_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.710
I0Z782_COCSC
HAP2-GCS1 domain-containing protein.
    
 0.531
I0Z9M6_COCSC
DNA polymerase delta small subunit like protein.
    
 0.503
I0YVU0_COCSC
Uncharacterized protein.
    
 0.468
I0YWK3_COCSC
DNA ligase.
     
 0.446
I0YS55_COCSC
Small nuclear ribonucleoprotein Sm D2.
    
 0.443
I0Z5J6_COCSC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.439
I0YVI3_COCSC
Small nuclear ribo protein F.
    
  0.418
I0YU45_COCSC
CHCH domain-containing protein.
   
   0.411
I0YQ01_COCSC
GRIM-19.
    
   0.406
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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