STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YK92_COCSCRibosomal protein L6; Belongs to the universal ribosomal protein uL6 family. (222 aa)    
Predicted Functional Partners:
I0YLE0_COCSC
60S ribosomal protein L5.
  
 0.978
I0Z9G1_COCSC
Ribosomal protein L32e.
  
 0.978
I0YL40_COCSC
60S ribosomal protein L7.
  
 0.977
I0YME3_COCSC
Ribosomal protein L30.
   
 0.972
I0YR01_COCSC
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.972
I0YR21_COCSC
Ribosomal protein L23a component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL23 family.
  
 0.972
I0YPB5_COCSC
Ribosomal protein L24 component of cytosolic 80S ribosome and 60S large subunit.
   
 0.970
I0Z4B1_COCSC
60S ribosomal protein L31.
   
 0.970
I0YU71_COCSC
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.968
I0ZAV2_COCSC
Uncharacterized protein.
   
 0.968
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.