STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YMA8_COCSCGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (393 aa)    
Predicted Functional Partners:
I0YP16_COCSC
Triosephosphate isomerase.
 
 0.988
I0Z4S1_COCSC
Triosephosphate isomerase.
 
 0.986
I0YN66_COCSC
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
  
 0.974
I0Z355_COCSC
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
  
 0.969
I0YSE8_COCSC
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
  
 0.967
I0Z745_COCSC
Phosphoribulokinase.
  
 
 0.967
I0YU56_COCSC
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.965
I0Z8E3_COCSC
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.965
I0YJZ4_COCSC
Transketolase 7.
  
 
 0.962
I0Z9E4_COCSC
Fructose-1,6-bisphosphate aldolase.
  
 0.949
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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