STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YMM2_COCSCUncharacterized protein. (569 aa)    
Predicted Functional Partners:
I0YUT5_COCSC
Not1-domain-containing protein.
   
 0.883
I0Z461_COCSC
CCR4-associated factor.
    
 0.880
I0Z820_COCSC
Rcd1-like protein.
    
 0.880
I0YV15_COCSC
NOT2_3_5 domain-containing protein.
    
 0.861
I0Z7P0_COCSC
Uncharacterized protein.
    
 0.861
I0YPH7_COCSC
Uncharacterized protein.
    
 0.728
I0YQ37_COCSC
Not3-domain-containing protein.
    
 0.728
I0YVG4_COCSC
Cytoplasmic DExD/H-box RNA helicase; Belongs to the DEAD box helicase family.
    
 0.678
I0Z2C4_COCSC
Aldo/keto reductase.
      
 0.658
I0YIJ1_COCSC
Thioredoxin domain-containing protein.
    
 0.654
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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