STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YMQ7_COCSCPolyubiquitin. (305 aa)    
Predicted Functional Partners:
I0YVL7_COCSC
Uncharacterized protein.
   
 0.996
I0YLH9_COCSC
UBC-like protein.
   
 0.994
I0Z062_COCSC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.994
I0YRE0_COCSC
MPN domain-containing protein.
    
 0.990
I0Z0D2_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.986
I0YWK3_COCSC
DNA ligase.
    
 0.980
I0YQL8_COCSC
HECT domain-containing protein.
   
 0.975
I0Z5P9_COCSC
Zf-UBP-domain-containing protein.
 
  
  0.936
I0YNQ2_COCSC
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.915
I0YU44_COCSC
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.914
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.