STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YR18_COCSCDiphthine synthase. (271 aa)    
Predicted Functional Partners:
I0YUW3_COCSC
Elongation factor 2.
    
 0.976
I0YY81_COCSC
Ubiquitin-like domain-containing protein.
   
  
 0.831
I0YQ55_COCSC
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
  
 0.801
I0YPN8_COCSC
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
      
 0.779
I0YT26_COCSC
RNA 3'-terminal phosphate cyclase.
   
  
 0.753
I0Z160_COCSC
CASP_C domain-containing protein.
      
 0.730
I0Z2P8_COCSC
CASP_C domain-containing protein.
      
 0.730
I0YTD2_COCSC
Diphthami_syn_2 domain-containing protein.
  
  
 0.724
I0Z954_COCSC
PRP3-domain-containing protein.
      
 0.723
I0YUK2_COCSC
RBP11-like subunits of RNA polymerase.
   
  
 0.696
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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