STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YUQ0_COCSCMov34-domain-containing protein. (216 aa)    
Predicted Functional Partners:
I0Z0H7_COCSC
Ubiquitin-like domain-containing protein.
   
 0.931
I0YJN9_COCSC
Snf7-domain-containing protein.
    
 
 0.826
I0Z0B7_COCSC
PCI-domain-containing protein.
   
 0.810
I0YQM8_COCSC
26S proteasome regulatory subunit.
   
 0.809
I0YMB2_COCSC
Putative 26S proteasome regulatory subunit.
   
 0.807
I0YMQ7_COCSC
Polyubiquitin.
    
 0.803
I0YNY2_COCSC
Uncharacterized protein.
    
 0.803
I0Z619_COCSC
Hexaubiquitin protein.
    
 0.803
I0Z1W8_COCSC
26S proteasome regulatory subunit.
   
 0.790
I0Z534_COCSC
PCI-domain-containing protein.
   
 0.788
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.