STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YVP2_COCSCUncharacterized protein. (795 aa)    
Predicted Functional Partners:
I0YZ66_COCSC
Uncharacterized protein.
    
 0.947
I0Z8Q5_COCSC
Uncharacterized protein.
   
 0.941
I0Z0A0_COCSC
Uncharacterized protein.
    
 0.939
I0Z7A2_COCSC
Sec39 domain-containing protein.
    
 0.939
I0YUT9_COCSC
R-SNARE protein, Sec22-family; Belongs to the synaptobrevin family.
   
 0.929
I0YXK6_COCSC
TPR-like protein.
    
 0.851
I0Z8M4_COCSC
SM/Sec1-family protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.843
I0Z7V7_COCSC
t-SNARE; Belongs to the syntaxin family.
   
 
 0.734
I0Z391_COCSC
N-ethylmaleimide sensitive fusion protein.
    
 0.728
I0Z3F4_COCSC
Qc-snare protein, Syn8/Syntaxin8-family.
   
 
 0.726
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.