STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z3S1_COCSCUbiquitin fusion protein. (109 aa)    
Predicted Functional Partners:
I0Z0H7_COCSC
Ubiquitin-like domain-containing protein.
  
0.996
I0YVL7_COCSC
Uncharacterized protein.
    
 0.995
I0YLH9_COCSC
UBC-like protein.
   
 0.994
I0Z062_COCSC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.994
I0YQQ4_COCSC
Ribosomal protein S28e.
   
 0.988
I0YT89_COCSC
40S ribosomal protein S29.
   
 0.984
I0Z0D2_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.983
I0YU44_COCSC
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.982
I0YR16_COCSC
Ribosomal protein S19 component of cytosolic 80S ribosome and 40S small subunit.
   
 0.981
I0YX21_COCSC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.981
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.