STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z6Z9_COCSCNup54 domain-containing protein. (451 aa)    
Predicted Functional Partners:
I0YMS5_COCSC
Nucleoporin-domain-containing protein.
   
 0.992
I0YVG7_COCSC
Nuclear pore protein.
   
 0.992
I0Z6G5_COCSC
Uncharacterized protein.
   
 0.991
I0Z5Q4_COCSC
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.978
I0ZB15_COCSC
Uncharacterized protein.
   
 0.976
I0Z9F9_COCSC
Nsp1_C domain-containing protein.
  
 
0.960
I0Z3L2_COCSC
Uncharacterized protein.
    
 0.956
I0Z865_COCSC
Uncharacterized protein.
   
 0.950
I0YM41_COCSC
C-terminal autoproteolytic domain of nucleoporin nup98.
   
 0.948
I0Z7D6_COCSC
Uncharacterized protein.
   
0.948
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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