STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z835_COCSCVPS9 domain-containing protein. (850 aa)    
Predicted Functional Partners:
I0YIA4_COCSC
Rab5a Gtpase domain At 1.05 A resolution.
    
 0.744
I0Z583_COCSC
Small rab-related GTPase.
    
 0.729
I0Z212_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.686
I0YJH4_COCSC
Ras-domain-containing protein.
   
 0.638
I0Z280_COCSC
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.611
I0YXM2_COCSC
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.537
I0YPH5_COCSC
Nagb/rpia/CoA transferase-like protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.506
I0Z0H7_COCSC
Ubiquitin-like domain-containing protein.
    
  0.471
I0Z402_COCSC
Uncharacterized protein.
   
 0.451
I0YWR7_COCSC
Galactose oxidase.
    
 0.447
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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