STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z8C3_COCSCDUF367-domain-containing protein. (202 aa)    
Predicted Functional Partners:
I0YVD8_COCSC
Kinase-like protein.
 
      0.897
I0Z1L6_COCSC
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
 
 
  
 0.821
I0Z867_COCSC
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
   
  
 0.689
I0Z2X5_COCSC
Uncharacterized protein.
   
  
 0.675
I0Z6L3_COCSC
Clavaminate synthase-like protein.
   
  
 0.674
I0Z796_COCSC
S-adenosyl-L-methionine-dependent methyltransferase.
   
  
 0.652
I0YUK6_COCSC
Pre-rRNA processing protein.
   
  
 0.605
I0Z5L9_COCSC
Uncharacterized protein; Belongs to the NOB1 family.
   
  
 0.598
I0Z9X0_COCSC
Uncharacterized protein.
 
      0.588
I0Z4V6_COCSC
DUF663-domain-containing protein.
   
  
 0.576
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.