STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0ZAZ5_COCSCQb-snare protein, VTI1-family. (229 aa)    
Predicted Functional Partners:
I0YV54_COCSC
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.997
I0Z263_COCSC
Qa-SNARE, SYP4/Tlg2p/Syntaxin 16-type; Belongs to the syntaxin family.
   
 0.994
I0YXK6_COCSC
TPR-like protein.
    
 0.993
I0Z3F4_COCSC
Qc-snare protein, Syn8/Syntaxin8-family.
   
 0.988
I0Z7V7_COCSC
t-SNARE; Belongs to the syntaxin family.
    
 
 0.973
I0YUT9_COCSC
R-SNARE protein, Sec22-family; Belongs to the synaptobrevin family.
   
 
 0.972
I0YV62_COCSC
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.967
I0YMI8_COCSC
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
    
 
 0.965
I0Z1S7_COCSC
ARM repeat-containing protein.
    
 
 0.965
I0Z277_COCSC
Pep3_Vps18 domain-containing protein.
    
 
 0.965
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.