Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VS_2169 | VS_2289 | VS_2169 | VS_2289 | Cysteine synthase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.707 |
VS_2169 | cysC | VS_2169 | VS_2786 | Cysteine synthase. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.681 |
VS_2169 | cysD | VS_2169 | VS_2789 | Cysteine synthase. | Sulfate adenylate transferase, subunit 2. | 0.730 |
VS_2169 | cysH | VS_2169 | VS_0301 | Cysteine synthase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.539 |
VS_2169 | cysI | VS_2169 | VS_0300 | Cysteine synthase. | Sulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.923 |
VS_2169 | cysJ | VS_2169 | VS_0299 | Cysteine synthase. | Sulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family. | 0.932 |
VS_2169 | cysN | VS_2169 | VS_2788 | Cysteine synthase. | Sulfate adenylate transferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.578 |
VS_2289 | VS_2169 | VS_2289 | VS_2169 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cysteine synthase. | 0.707 |
VS_2289 | cysC | VS_2289 | VS_2786 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.681 |
VS_2289 | cysD | VS_2289 | VS_2789 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Sulfate adenylate transferase, subunit 2. | 0.739 |
VS_2289 | cysH | VS_2289 | VS_0301 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.541 |
VS_2289 | cysI | VS_2289 | VS_0300 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Sulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.923 |
VS_2289 | cysJ | VS_2289 | VS_0299 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Sulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family. | 0.934 |
VS_2289 | cysN | VS_2289 | VS_2788 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Sulfate adenylate transferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.578 |
VS_II0274 | VS_II0345 | VS_II0274 | VS_II0345 | Flavodoxin reductase family 1 protein. | Putative ferredoxin oxidoreductase protein. | 0.857 |
VS_II0274 | cysD | VS_II0274 | VS_2789 | Flavodoxin reductase family 1 protein. | Sulfate adenylate transferase, subunit 2. | 0.750 |
VS_II0274 | cysH | VS_II0274 | VS_0301 | Flavodoxin reductase family 1 protein. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.782 |
VS_II0274 | cysI | VS_II0274 | VS_0300 | Flavodoxin reductase family 1 protein. | Sulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.991 |
VS_II0274 | cysJ | VS_II0274 | VS_0299 | Flavodoxin reductase family 1 protein. | Sulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family. | 0.997 |
VS_II0345 | VS_II0274 | VS_II0345 | VS_II0274 | Putative ferredoxin oxidoreductase protein. | Flavodoxin reductase family 1 protein. | 0.857 |
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