STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grcAAutonomous glycyl radical cofactor; Acts as a radical domain for damaged PFL and possibly other radical proteins. (125 aa)    
Predicted Functional Partners:
VS_2795
Hypothetical protein.
   
  0.931
VS_II1421
Conserved hypothetical protein.
   
  0.931
VS_0997
Phosphate acetyltransferase.
     
 0.789
VS_0958
Alcohol dehydrogenase/acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.786
VS_1050
Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
  
     0.774
VS_II0455
Pyruvate formate-lyase activating enzyme.
  
     0.770
VS_3067
Predicted flavodoxin oxidoreductases.
    
  0.688
VS_1052
Formate acetyltransferase.
  
 
 
0.563
VS_1891
Cytochrome P450; Function of homologous gene experimentally demonstrated in another organism; structure; Belongs to the cytochrome P450 family.
    
  0.533
VS_II0669
Nitrite reductase (NAD(P)H), small subunit.
    
  0.533
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
Server load: low (26%) [HD]