Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VS_0483 | VS_2087 | VS_0483 | VS_2087 | Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Anthranilate phosphoribosyltransferase. | 0.640 |
VS_0483 | VS_2893 | VS_0483 | VS_2893 | Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Bifunctional aspartokinase/homoserine dehydrogenase II; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.989 |
VS_0483 | trpA | VS_0483 | VS_1971 | Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.919 |
VS_0483 | trpB | VS_0483 | VS_1970 | Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.869 |
VS_0483 | trpC | VS_0483 | VS_1969 | Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Tryptophan biosynthesis protein trpCF. | 0.879 |
VS_0483 | trpD | VS_0483 | VS_1968 | Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.640 |
VS_1798 | VS_1966 | VS_1798 | VS_1966 | Para-aminobenzoate synthase component I. | Anthranilate synthase alpha subunit. | 0.751 |
VS_1798 | VS_1967 | VS_1798 | VS_1967 | Para-aminobenzoate synthase component I. | Anthranilate synthase beta subunit. | 0.999 |
VS_1798 | VS_2087 | VS_1798 | VS_2087 | Para-aminobenzoate synthase component I. | Anthranilate phosphoribosyltransferase. | 0.990 |
VS_1798 | VS_2862 | VS_1798 | VS_2862 | Para-aminobenzoate synthase component I. | Anthranilate synthase component II. | 0.999 |
VS_1798 | trpA | VS_1798 | VS_1971 | Para-aminobenzoate synthase component I. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.938 |
VS_1798 | trpB | VS_1798 | VS_1970 | Para-aminobenzoate synthase component I. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.949 |
VS_1798 | trpC | VS_1798 | VS_1969 | Para-aminobenzoate synthase component I. | Tryptophan biosynthesis protein trpCF. | 0.999 |
VS_1798 | trpD | VS_1798 | VS_1968 | Para-aminobenzoate synthase component I. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.996 |
VS_1966 | VS_1798 | VS_1966 | VS_1798 | Anthranilate synthase alpha subunit. | Para-aminobenzoate synthase component I. | 0.751 |
VS_1966 | VS_1967 | VS_1966 | VS_1967 | Anthranilate synthase alpha subunit. | Anthranilate synthase beta subunit. | 0.999 |
VS_1966 | VS_2087 | VS_1966 | VS_2087 | Anthranilate synthase alpha subunit. | Anthranilate phosphoribosyltransferase. | 0.991 |
VS_1966 | VS_2862 | VS_1966 | VS_2862 | Anthranilate synthase alpha subunit. | Anthranilate synthase component II. | 0.999 |
VS_1966 | trpA | VS_1966 | VS_1971 | Anthranilate synthase alpha subunit. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.969 |
VS_1966 | trpB | VS_1966 | VS_1970 | Anthranilate synthase alpha subunit. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.976 |
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