Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VS_1208 | VS_1787 | VS_1208 | VS_1787 | Hypothetical protein. | DnaK-related protein; Belongs to the heat shock protein 70 family. | 0.897 |
VS_1208 | VS_1788 | VS_1208 | VS_1788 | Hypothetical protein. | Putative chaperone protein dnaK (Heat shock protein 70); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.897 |
VS_1208 | VS_1789 | VS_1208 | VS_1789 | Hypothetical protein. | DnaK-related protein (fragment). | 0.897 |
VS_1208 | VS_II0360 | VS_1208 | VS_II0360 | Hypothetical protein. | Putative heat shock protein 70 family protein. | 0.897 |
VS_1208 | dnaK | VS_1208 | VS_0651 | Hypothetical protein. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.897 |
VS_1208 | hscA | VS_1208 | VS_0611 | Hypothetical protein. | HSP70 molecular chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.897 |
VS_1208 | htpG | VS_1208 | VS_2269 | Hypothetical protein. | Chaperone protein htpG; Molecular chaperone. Has ATPase activity. | 0.983 |
VS_1208 | waaP | VS_1208 | VS_0192 | Hypothetical protein. | 3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.420 |
VS_1787 | VS_1208 | VS_1787 | VS_1208 | DnaK-related protein; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.897 |
VS_1787 | VS_1788 | VS_1787 | VS_1788 | DnaK-related protein; Belongs to the heat shock protein 70 family. | Putative chaperone protein dnaK (Heat shock protein 70); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.621 |
VS_1787 | VS_1789 | VS_1787 | VS_1789 | DnaK-related protein; Belongs to the heat shock protein 70 family. | DnaK-related protein (fragment). | 0.950 |
VS_1787 | VS_II0764 | VS_1787 | VS_II0764 | DnaK-related protein; Belongs to the heat shock protein 70 family. | Heat shock protein DnaJ. | 0.897 |
VS_1787 | dnaJ | VS_1787 | VS_0652 | DnaK-related protein; Belongs to the heat shock protein 70 family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.943 |
VS_1787 | htpG | VS_1787 | VS_2269 | DnaK-related protein; Belongs to the heat shock protein 70 family. | Chaperone protein htpG; Molecular chaperone. Has ATPase activity. | 0.981 |
VS_1787 | waaP | VS_1787 | VS_0192 | DnaK-related protein; Belongs to the heat shock protein 70 family. | 3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.641 |
VS_1788 | VS_1208 | VS_1788 | VS_1208 | Putative chaperone protein dnaK (Heat shock protein 70); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | Hypothetical protein. | 0.897 |
VS_1788 | VS_1787 | VS_1788 | VS_1787 | Putative chaperone protein dnaK (Heat shock protein 70); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | DnaK-related protein; Belongs to the heat shock protein 70 family. | 0.621 |
VS_1788 | VS_1789 | VS_1788 | VS_1789 | Putative chaperone protein dnaK (Heat shock protein 70); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | DnaK-related protein (fragment). | 0.990 |
VS_1788 | VS_II0764 | VS_1788 | VS_II0764 | Putative chaperone protein dnaK (Heat shock protein 70); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | Heat shock protein DnaJ. | 0.897 |
VS_1788 | dnaJ | VS_1788 | VS_0652 | Putative chaperone protein dnaK (Heat shock protein 70); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.943 |
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