Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VS_0477 | VS_0964 | VS_0477 | VS_0964 | Aerobic respiration control sensor protein ArcB. | Sensory box histidine kinase/response regulator. | 0.999 |
VS_0477 | VS_1129 | VS_0477 | VS_1129 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine kinase. | 0.999 |
VS_0477 | VS_1155 | VS_0477 | VS_1155 | Aerobic respiration control sensor protein ArcB. | Sensory box histidine kinase/response regulator. | 0.999 |
VS_0477 | VS_1315 | VS_0477 | VS_1315 | Aerobic respiration control sensor protein ArcB. | Putative two-component regulatory system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.999 |
VS_0477 | VS_1456 | VS_0477 | VS_1456 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine kinase. | 0.999 |
VS_0477 | VS_2614 | VS_0477 | VS_2614 | Aerobic respiration control sensor protein ArcB. | Sensor protein barA. | 0.999 |
VS_0477 | VS_II0943 | VS_0477 | VS_II0943 | Aerobic respiration control sensor protein ArcB. | ABC transporter: Substrate binding protein precursor. | 0.991 |
VS_0477 | VS_II1065 | VS_0477 | VS_II1065 | Aerobic respiration control sensor protein ArcB. | Hypothetical protein. | 0.999 |
VS_0964 | VS_0477 | VS_0964 | VS_0477 | Sensory box histidine kinase/response regulator. | Aerobic respiration control sensor protein ArcB. | 0.999 |
VS_0964 | VS_1129 | VS_0964 | VS_1129 | Sensory box histidine kinase/response regulator. | Signal transduction histidine kinase. | 0.999 |
VS_0964 | VS_1155 | VS_0964 | VS_1155 | Sensory box histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
VS_0964 | VS_1315 | VS_0964 | VS_1315 | Sensory box histidine kinase/response regulator. | Putative two-component regulatory system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.999 |
VS_0964 | VS_1456 | VS_0964 | VS_1456 | Sensory box histidine kinase/response regulator. | Signal transduction histidine kinase. | 0.998 |
VS_0964 | VS_2614 | VS_0964 | VS_2614 | Sensory box histidine kinase/response regulator. | Sensor protein barA. | 0.999 |
VS_0964 | VS_II0943 | VS_0964 | VS_II0943 | Sensory box histidine kinase/response regulator. | ABC transporter: Substrate binding protein precursor. | 0.991 |
VS_0964 | VS_II1065 | VS_0964 | VS_II1065 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.999 |
VS_1129 | VS_0477 | VS_1129 | VS_0477 | Signal transduction histidine kinase. | Aerobic respiration control sensor protein ArcB. | 0.999 |
VS_1129 | VS_0964 | VS_1129 | VS_0964 | Signal transduction histidine kinase. | Sensory box histidine kinase/response regulator. | 0.999 |
VS_1129 | VS_1155 | VS_1129 | VS_1155 | Signal transduction histidine kinase. | Sensory box histidine kinase/response regulator. | 0.999 |
VS_1129 | VS_1315 | VS_1129 | VS_1315 | Signal transduction histidine kinase. | Putative two-component regulatory system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.999 |
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