STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI_161660Signal recognition particle 68 kDa protein, putative. (207 aa)    
Predicted Functional Partners:
83.t00029
Signal recognition particle 19 kDa protein, putative.
    
 0.997
EHI_022730
Signal recognition particle 54 kDa protein, putative.
    
 0.982
203.t00021
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
 0.982
109.t00019
Signal recognition particle receptor alpha subunit, putative.
   
 0.939
404.t00006
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.819
28.t00013
Ribosomal protein L23A, putative; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.818
129.t00016
60S ribosomal protein L2/L8, putative.
   
   0.809
54.t00008
60S ribosomal protein L35, putative.
   
 
 0.804
172.t00011
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.
   
   0.792
762.t00001
Uncharacterized protein.
   
 
 0.792
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.