STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
871.t00001RNA modification enzymes, MiaB-family. (438 aa)    
Predicted Functional Partners:
203.t00019
Uncharacterized protein.
   
 
 0.952
23.t00020
tRNA isopentenyltransferase, putative.
 
  
 0.917
472.t00007
40S ribosomal protein S23, putative; Belongs to the universal ribosomal protein uS12 family.
  
  
 0.811
254.t00012
Centromere/microtubule binding protein cbf5, putative.
  
  
 0.811
EhnifS
Iron-sulphur cluster assembly protein.
  
  
 0.806
124.t00018
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
  
  
 0.799
79.t00027
40S ribosomal protein S14, putative; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.777
20.t00045
Isoleucyl-tRNA synthetase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.773
15.t00032
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
  
  
 0.770
202.t00008
Triosephosphate isomerase.
  
  
 0.766
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.