STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
19.t00043Beta-galactosidase, putative. (567 aa)    
Predicted Functional Partners:
349.t00005
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.926
349.t00010
Galactokinase, putative.
  
  
 0.868
226.t00013
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 0.821
11.t00020
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.734
86.t00021
Glucosamine-6-phosphate isomerase, putative.
    
 0.732
77.t00009
Glycogen debranching enzyme, putative.
  
  
 0.697
200.t00017
Heat shock transcription factor, putative.
   
  
 0.685
298.t00004
Uncharacterized protein.
   
 
 0.678
472.t00007
40S ribosomal protein S23, putative; Belongs to the universal ribosomal protein uS12 family.
   
  
 0.675
20.t00026
Uncharacterized protein.
  
  
 0.673
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.