STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
260.t0000660S ribosomal protein L27, putative. (139 aa)    
Predicted Functional Partners:
184.t00013
60S ribosomal protein L35a, putative.
   
 0.997
92.t00039
40S ribosomal protein S10, putative.
   
 
 0.997
66.t00032
60S ribosomal protein L10a-2, putative.
   
 0.996
121.t00024
60S ribosomal protein L39, putative.
   
 0.996
215.t00013
60S ribosomal protein L5, putative.
  
 0.996
28.t00013
Ribosomal protein L23A, putative; Belongs to the universal ribosomal protein uL23 family.
  
 0.996
762.t00001
Uncharacterized protein.
   
 0.996
129.t00016
60S ribosomal protein L2/L8, putative.
  
 0.996
345.t00002
60S ribosomal protein L18, putative.
  
 0.996
336.t00006
60S ribosomal protein L36, putative.
   
 0.996
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.