STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2UXP6_NAEGRPredicted protein. (863 aa)    
Predicted Functional Partners:
D2VKZ0_NAEGR
Predicted protein.
   
 0.998
D2W153_NAEGR
Predicted protein.
    
 0.994
D2VD46_NAEGR
Predicted protein.
   
 0.992
D2VER5_NAEGR
Integrator complex subunit 4.
   
 0.992
D2UY51_NAEGR
Predicted protein.
    
 0.991
D2VME5_NAEGR
Beta-Casp domain-containing protein.
    
 0.990
D2V5D1_NAEGR
C2 domain-containing protein.
    
 0.984
D2VXA7_NAEGR
Predicted protein.
   
 0.837
D2VXA8_NAEGR
Predicted protein.
   
 0.837
NAEGRDRAFT_858
Predicted protein.
    
 0.804
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.