STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V0C6_NAEGRPredicted protein. (1018 aa)    
Predicted Functional Partners:
D2V9U0_NAEGR
Predicted protein.
   
 0.563
D2VT68_NAEGR
Predicted protein.
  
 0.541
D2VGW4_NAEGR
Uncharacterized protein.
   
 0.485
D2VHK4_NAEGR
Predicted protein.
   
 0.485
D2UZR4_NAEGR
Utp12 domain-containing protein.
   
 0.482
D2VFG9_NAEGR
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.469
D2UYW3_NAEGR
Predicted protein.
   
  0.468
D2UXI1_NAEGR
Predicted protein.
    
  0.467
D2V9U2_NAEGR
Predicted protein.
    
  0.467
D2VB81_NAEGR
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.467
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.