STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2VQK5_NAEGRPredicted protein. (496 aa)    
Predicted Functional Partners:
D2VYD0_NAEGR
Predicted protein.
   
 0.888
FM144
Uncharacterized protein FM144.
   
 0.517
D2VIK1_NAEGR
Predicted protein.
    
 0.495
D2VG51_NAEGR
Uncharacterized protein.
  
 0.490
D2V2I6_NAEGR
Predicted protein.
   
 0.463
D2V6W9_NAEGR
Predicted protein.
   
 0.463
D2W5A6_NAEGR
Predicted protein.
   
 0.463
D2VHX4_NAEGR
ASH domain-containing protein.
  
  0.440
D2VJW4_NAEGR
Ankyrin domain-containing protein.
   
 0.423
D2UYG1_NAEGR
GAS domain-containing protein.
  
 
   0.422
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.