STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2W3Q7_NAEGRPredicted protein. (717 aa)    
Predicted Functional Partners:
D2VZ29_NAEGR
Predicted protein.
   
 0.996
D2VQ57_NAEGR
Predicted protein.
    
 0.839
D2VL19_NAEGR
Predicted protein.
    
 0.788
D2UXU8_NAEGR
Predicted protein.
    
 0.762
D2VZZ8_NAEGR
Predicted protein.
   
 0.733
D2V7C0_NAEGR
Predicted protein.
    
 0.727
D2UZ85_NAEGR
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.696
D2V2H8_NAEGR
Eukaryotic elongation factor 1 alpha family protein.
    
 0.624
D2VET4_NAEGR
Nucleoporin nup98.
   
 
  0.588
D2VX57_NAEGR
Predicted protein.
    
 0.576
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.