STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD79901.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
SDD79930.1
Cytochrome c554 and c-prime.
  
  
 0.746
SDD79863.1
tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family.
       0.526
SDE46956.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
   
  
 0.436
SDD79967.1
Hypothetical protein.
       0.400
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.