STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE36392.1Nitrogenase molybdenum-cofactor synthesis protein NifE. (449 aa)    
Predicted Functional Partners:
nifH
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 0.990
SDE36358.1
Nitrogenase molybdenum-iron protein NifN; Belongs to the NifD/NifK/NifE/NifN family.
    
0.984
SDE34547.1
Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
0.975
SDE34627.1
Nitrogen fixation protein NifB.
 
  
 0.969
SDE34512.1
Mo-nitrogenase MoFe protein subunit NifD precursor.
 
 
0.939
SDE41620.1
Ammonium transporter.
   
  
 0.899
SDE34583.1
Nitrogen fixation protein NifX.
 
  
 0.894
SDE34599.1
Ferredoxin III, nif-specific.
 
    0.794
SDD88804.1
Rubredoxin.
   
 
 0.559
SDE34175.1
Ammonium transporter.
   
  
 0.536
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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