STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PKW1_SCHCMGOLD domain-containing protein. (203 aa)    
Predicted Functional Partners:
D8QH33_SCHCM
GOLD domain-containing protein.
   
0.999
D8Q3D1_SCHCM
GOLD domain-containing protein.
   
0.987
D8Q736_SCHCM
GOLD domain-containing protein.
   
0.940
D8PK26_SCHCM
Expressed protein.
   
 0.929
D8QDH3_SCHCM
Uncharacterized protein.
   
 0.848
D8QH38_SCHCM
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.821
D8Q6S4_SCHCM
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.800
D8PSQ0_SCHCM
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.798
D8Q9R6_SCHCM
Uncharacterized protein.
    
 0.779
D8PS87_SCHCM
t-SNARE coiled-coil homology domain-containing protein.
    
 0.759
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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