STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PME6_SCHCMPKS_ER domain-containing protein. (341 aa)    
Predicted Functional Partners:
D8QB71_SCHCM
PKS_ER domain-containing protein.
  
  
 0.481
D8QB67_SCHCM
PKS_ER domain-containing protein.
  
  
 0.470
D8Q9T8_SCHCM
PKS_ER domain-containing protein.
  
  
 0.467
D8Q130_SCHCM
PKS_ER domain-containing protein.
  
  
 0.457
D8QDF5_SCHCM
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
   
  
 0.457
D8PW32_SCHCM
Uncharacterized protein; Belongs to the phosphohexose mutase family.
 
    
 0.453
D8PMD5_SCHCM
USP domain-containing protein; Belongs to the peptidase C19 family.
 
 
    0.425
D8QAI1_SCHCM
PKS_ER domain-containing protein.
  
  
 0.422
D8Q136_SCHCM
PKS_ER domain-containing protein.
  
  
 0.421
D8Q3N4_SCHCM
Amine oxidase.
    
 0.421
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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