STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PMR0_SCHCMSaccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (373 aa)    
Predicted Functional Partners:
D8Q4K9_SCHCM
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
   
 
 0.965
D8Q837_SCHCM
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
   
 
 0.965
D8Q6Z3_SCHCM
AlaDh_PNT_N domain-containing protein.
  
 
0.962
D8QDL3_SCHCM
Carrier domain-containing protein.
 
 
 0.686
D8PKC7_SCHCM
Iso_dh domain-containing protein.
   
  
 0.620
D8PSH2_SCHCM
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.619
D8Q5E4_SCHCM
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
  
 0.608
D8QLX7_SCHCM
Uncharacterized protein.
 
      0.549
D8Q3A5_SCHCM
Tryptophan synthase.
  
  
 0.526
D8Q488_SCHCM
tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
 
      0.498
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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