STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PP91_SCHCMUncharacterized protein. (611 aa)    
Predicted Functional Partners:
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 0.855
D8PL49_SCHCM
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 0.829
D8QG71_SCHCM
Uncharacterized protein.
   
   0.806
D8Q7U8_SCHCM
RNA helicase.
  
    0.780
D8PRX6_SCHCM
Uncharacterized protein.
   
 0.779
D8QFJ0_SCHCM
Uncharacterized protein.
   
 
 0.762
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.739
D8PQG0_SCHCM
Uncharacterized protein.
   
 0.731
D8QKC8_SCHCM
N-acetyltransferase domain-containing protein.
   
  0.728
D8Q2X9_SCHCM
Uncharacterized protein.
   
  
0.715
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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