STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV6HD2 mating type protein. (623 aa)    
Predicted Functional Partners:
D8Q7J6_SCHCM
Homeobox domain-containing protein.
   
  
 0.575
AAZ4
A-alpha Z4, HD1 mating type protein.
    
 
 0.492
ABU6
A-beta-U6, HD1 mating type protein.
    
 
 0.492
ABT6
A-beta-T6, HD1 mating type protein.
    
 
 0.492
ABS6
A-beta-S6, HD1 mating-type protein.
    
 
 0.492
ABQ6
A-beta Q6, HD1 mating type protein.
    
 
 0.492
D8PLS9_SCHCM
HMG box domain-containing protein.
      
 0.457
D8Q0I5_SCHCM
Fork-head domain-containing protein.
   
  
 0.410
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.