STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8QFW8_SCHCMGlycoside hydrolase family 93 protein. (370 aa)    
Predicted Functional Partners:
D8PLI5_SCHCM
Uncharacterized protein.
   
 0.985
D8QBP4_SCHCM
Bms1-type G domain-containing protein.
   
 0.982
D8PS63_SCHCM
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.980
D8PML1_SCHCM
Uncharacterized protein.
   
 0.977
D8PQV4_SCHCM
RIO domain-containing protein.
   
 0.977
D8Q6U2_SCHCM
S4 RNA-binding domain-containing protein.
   
 0.957
D8Q3H3_SCHCM
Uncharacterized protein.
   
 
 0.952
D8QA67_SCHCM
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.952
D8QKZ2_SCHCM
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.952
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.949
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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