STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8QLS1_SCHCMUncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (81 aa)    
Predicted Functional Partners:
D8PTR9_SCHCM
Uncharacterized protein.
   
   0.992
D8Q903_SCHCM
Uncharacterized protein.
   
   0.992
D8PZG0_SCHCM
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.953
D8Q6I5_SCHCM
Uncharacterized protein.
   
 0.948
D8PQ17_SCHCM
Ribosomal_L18_c domain-containing protein.
   
 0.944
D8Q9D8_SCHCM
Uncharacterized protein.
   
 0.944
D8PPR2_SCHCM
Uncharacterized protein.
   
 0.943
D8QD23_SCHCM
Ribosomal_L7Ae domain-containing protein.
   
 0.942
D8Q8A2_SCHCM
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.937
D8QCT2_SCHCM
KOW domain-containing protein.
   
 0.935
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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