STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8Q0I4_SCHCMDNA ligase. (1065 aa)    
Predicted Functional Partners:
D8QD50_SCHCM
Ku70-like protein.
  
 0.986
D8QKI4_SCHCM
Ku80-like protein.
   
 0.983
D8Q3D0_SCHCM
DNA_LIGASE_A3 domain-containing protein.
     
0.913
D8PXC7_SCHCM
DRMBL domain-containing protein.
   
 0.870
D8Q827_SCHCM
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.864
D8QGE9_SCHCM
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
  
 0.849
D8PP75_SCHCM
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.837
D8Q3H8_SCHCM
Uncharacterized protein.
  
 0.777
D8QED5_SCHCM
Rad52-like protein.
    
 
 0.777
D8Q9V7_SCHCM
BRCT domain-containing protein.
  
 0.763
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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